2WEK Oxidoreductase date Mar 31, 2009
title Crystal Structure Of The Human Mgc45594 Gene Product In Comp Diclofenac
authors N.Shafqat, W.W.Yue, E.Ugochukwu, F.Niesen, C.Smee, C.Arrowsmith, J A.Edwards, C.Bountra, U.Oppermann
compound source
Molecule: Zinc-Binding Alcohol Dehydrogenase Domain-Contain Protein 2;
Chain: A, B
Fragment: Residues 33-371
Synonym: Mgc45594
Ec: 1.-.-.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pnic28-Bsa4
symmetry Space Group: P 1
R_factor 0.165 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.834 51.572 75.716 94.61 91.54 101.72
method X-Ray Diffractionresolution 1.90 Å
ligand CL, DIF, GOL, NAP, PO4 enzyme Oxidoreductase E.C.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • 13-prostaglandin reductase a...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (2wek.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2wek.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 2WEK
  • CSU: Contacts of Structural Units for 2WEK
  • Structure Factors (711 Kb)
  • Retrieve 2WEK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WEK from S2C, [Save to disk]
  • Re-refined 2wek structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WEK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WEK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WEK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wek] [2wek_B] [2wek_A]
  • SWISS-PROT database: [Q8N4Q0]
  • Domain organization of [ZADH2_HUMAN] by SWISSPFAM
  • Other resources with information on 2WEK
  • Community annotation for 2WEK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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