2WID Hydrolase date May 11, 2009
title Nonaged Form Of Human Butyrylcholinesterase Inhibited By Tabun Analogue Ta1
authors E.Carletti, N.Aurbek, E.Gillon, M.Loiodice, Y.Nicolet, J.Fontecilla, P.Masson, H.Thiermann, F.Nachon, F.Worek
compound source
Molecule: Cholinesterase
Chain: A
Fragment: Residues 29-557
Synonym: Butyrylcholinesterase, Acylcholine Acylhydrolase, Choline Esterase II, Pseudocholinesterase;
Ec: 3.1.1.8
Engineered: Yes
Mutation: Yes
Other_details: S198 Is Phosphoramidylated
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_taxid: 10029
Expression_system_strain: Cho-K1
Expression_system_cell_line: Ovary Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgs
symmetry Space Group: I 4 2 2
R_factor 0.189 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
155.038 155.038 126.206 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CL, FUL, NA, NAG, SO4, TUN enzyme Hydrolase E.C.3.1.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-activity analysis of aging and reactivation of human butyrylcholinesterase inhibited by analogues of tabun., Carletti E, Aurbek N, Gillon E, Loiodice M, Nicolet Y, Fontecilla-Camps JC, Masson P, Thiermann H, Nachon F, Worek F, Biochem J. 2009 Apr 15. PMID:19368529
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (2wid.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 2WID
  • CSU: Contacts of Structural Units for 2WID
  • Likely Quarternary Molecular Structure file(s) for 2WID
  • Structure Factors (485 Kb)
  • Retrieve 2WID in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WID from S2C, [Save to disk]
  • Re-refined 2wid structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WID in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WID
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WID, from MSDmotif at EBI
  • Fold representative 2wid from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wid] [2wid_A]
  • SWISS-PROT database: [P06276]
  • Domain organization of [CHLE_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 2WID with the sequences similar proteins can be viewed for 2WID's classification [CHLE_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [CHLE_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2WID
  • Community annotation for 2WID at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science