2WJ0 Hydrolase Dna date May 18, 2009
title Crystal Structures Of Holliday Junction Resolvases From Archaeoglobus Fulgidus Bound To Dna Substrate
authors C.Carolis, C.Koehler, C.Sauter, J.Basquin, D.Suck, I.Toeroe
compound source
Molecule: Archaeal Hjc
Chain: A, B
Fragment: Residues 2-136
Engineered: Yes
Other_details: N-Terminus Contains Extra Residues As A Result Of Cloning Procedure;
Organism_scientific: Archaeoglobus Fulgidus
Organism_taxid: 2234
Strain: 4304
Atcc: 49558
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Plyss
Expression_system_plasmid: Petm12
Other_details: German Collection Of Microorganisms (Dsm)

Molecule: Half-Junction
Chain: C
Other_details: Synthesized

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Synthesized By Metabion Gmbh, Martinsried, Germany;

Molecule: Half-Junction
Chain: D
Other_details: Synthesized

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Synthesized By Metabion Gmbh, Martinsried, Germany
symmetry Space Group: P 63 2 2
R_factor 0.2015 R_Free 0.2781
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.980 110.980 150.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.10 Å
ligand NCO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (2wj0.pdb1.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 2WJ0
  • CSU: Contacts of Structural Units for 2WJ0
  • Likely Quarternary Molecular Structure file(s) for 2WJ0
  • Structure Factors (145 Kb)
  • Retrieve 2WJ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WJ0 from S2C, [Save to disk]
  • Re-refined 2wj0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WJ0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WJ0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WJ0, from MSDmotif at EBI
  • Fold representative 2wj0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wj0] [2wj0_D] [2wj0_C] [2wj0_B] [2wj0_A]
  • SWISS-PROT database: [O28314]
  • Domain organization of [O28314_ARCFU] by SWISSPFAM
  • Other resources with information on 2WJ0
  • Community annotation for 2WJ0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science