2WMD Oxidoreductase date Jun 30, 2009
title Crystal Structure Of Nmra-Like Family Domain Containing Prot Complex With Nadp And 2-(4-Chloro-Phenylamino)-Nicotinic Ac
authors C.Bhatia, E.Pilka, F.Niesen, W.W.Yue, E.Ugochukwu, P.Savitsky, V.H A.K.Roos, P.Filippakopoulos, F.Von Delft, T.Heightman, C.Arrows J.Weigelt, A.Edwards, C.Bountra, U.Oppermann
compound source
Chain: A
Fragment: Residues 1-298
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3-Prare2
Expression_system_vector: Pnic28-Bsa4
symmetry Space Group: P 2 21 21
R_factor 0.202 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.722 79.734 86.362 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand NAP, ZZ0 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (2wmd.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 2WMD
  • CSU: Contacts of Structural Units for 2WMD
  • Likely Quarternary Molecular Structure file(s) for 2WMD
  • Structure Factors (364 Kb)
  • Retrieve 2WMD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WMD from S2C, [Save to disk]
  • Re-refined 2wmd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WMD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WMD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WMD, from MSDmotif at EBI
  • Fold representative 2wmd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wmd] [2wmd_A]
  • SWISS-PROT database: [Q9HBL8]
  • Domain organization of [NMRL1_HUMAN] by SWISSPFAM
  • Other resources with information on 2WMD
  • Community annotation for 2WMD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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