2WNG Cell Adhesion date Jul 09, 2009
title Complete Extracellular Structure Of Human Signal Regulatory (Sirp) Alpha
authors D.Hatherley, S.C.Graham, K.Harlos, D.I.Stuart, A.N.Barclay
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type Su
Chain: A
Fragment: Ectodomain, Residues 31-319
Synonym: Shp Substrate 1, Shps-1, Inhibitory Receptor Shps- Regulatory Protein Alpha-1, Sirp-Alpha-2, Sirp-Alpha-3, Myd Antigen, Brain Ig-Like Molecule With Tyrosine-Based Activat Motifs, Macrophage Fusion Receptor, Cd172 Antigen-Like Fami A, Bit, Sirp-Alpha-1 Human Signal Regulatory Protein Alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_variant: Lec3.2.8.1
Expression_system_cell_line: Cho
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pee14
symmetry Space Group: P 21 21 21
R_factor 0.219 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.410 84.370 98.860 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.49 Å
ligand NAG enzyme
Primary referenceStructure of signal regulatory protein {alpha}: A link to antigen receptor evolution., Hatherley D, Graham SC, Harlos K, Stuart DI, Barclay AN, J Biol Chem. 2009 Jul 23. PMID:19628875
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2wng.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2WNG
  • CSU: Contacts of Structural Units for 2WNG
  • Likely Quarternary Molecular Structure file(s) for 2WNG
  • Structure Factors (184 Kb)
  • Retrieve 2WNG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WNG from S2C, [Save to disk]
  • Re-refined 2wng structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WNG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WNG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WNG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wng] [2wng_A]
  • SWISS-PROT database: [P78324]
  • Domain organization of [SHPS1_HUMAN] by SWISSPFAM
  • Domains found in 2WNG: [IG_like] [IGc1 ] by SMART
  • Other resources with information on 2WNG
  • Community annotation for 2WNG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science