2WOM Transferase date Jul 27, 2009
title Crystal Structure Of Uk-453061 Bound To Hiv-1 Reverse Transc (K103n).
authors C.Phillips, S.L.Irving, T.Knoechel, H.Ringrose
compound source
Molecule: Hiv-1 Reverse Transcriptase
Chain: A
Fragment: P66, Residues 588-1147
Synonym: Hiv-1 Rt
Ec: 2.7.7.49
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Hiv-1 Reverse Transcriptase
Chain: B
Fragment: P51, Residues 588-1027
Synonym: Hiv-1 Rt
Ec: 2.7.7.49
Engineered: Yes
Mutation: Yes

Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.228 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.600 154.300 155.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand ZZE enzyme Transferase E.C.2.7.7.49 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceLersivirine: a Non-Nucleoside Reverse Transcriptase Inhibitor with Activity against Drug-Resistant Human Immunodeficiency Virus-1., Corbau R, Mori J, Phillips C, Fishburn L, Martin A, Mowbray C, Panton W, Smith-Burchnell C, Thornberry A, Ringrose H, Knochel T, Irving S, Westby M, Wood A, Perros M, Antimicrob Agents Chemother. 2010 Jul 26. PMID:20660667
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (2wom.pdb1.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 2WOM
  • CSU: Contacts of Structural Units for 2WOM
  • Structure Factors (303 Kb)
  • Retrieve 2WOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WOM from S2C, [Save to disk]
  • Re-refined 2wom structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WOM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WOM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wom_B] [2wom_A] [2wom]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2WOM
  • Community annotation for 2WOM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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