2WOU	Transferase	date	Jul 28, 2009
title	Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)Oxy)-2- Pyridyl)Amino)Benzenesulfonamide
authors	J.E.Debreczeni, R.A.Norman, F.W.Goldberg, R.A.Ward, R.Finlay, S.J N.J.Roberts, A.P.Dishington, H.J.Gingell, K.F.Wickson, A.L.Robe
compound		source
Molecule: Tgf-Beta Receptor Type-1 Chain: A Fragment: Catalytic Domain, Residues 200-503 Synonym: Transforming Growth Factor-Beta Receptor Type I, T Receptor Type I, Tgf-Beta Type I Receptor, Tbetar-I, Tgfr- Serinethreonine-Protein Kinase Receptor R4, Skr4, Activin Receptor-Like Kinase 5, Alk-5; Ec: 2.7.11.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.22585 R_Free 0.30211
crystal cell	length a length b length c angle alpha angle beta angle gamma 41.881 77.042 90.387 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	EDO, ZZF BindingDB	enzyme	Transferase E.C.2.7.11.30 BRENDA
Primary reference	Rapid Generation of a High Quality Lead for Transforming Growth Factor-beta (TGF-beta) Type I Receptor (ALK5) (dagger)., Goldberg FW, Ward RA, Powell SJ, Debreczeni JE, Norman RA, Roberts NJ, Dishington AP, Gingell HJ, Wickson KF, Roberts AL, J Med Chem. 2009 Sep 8. PMID:19736928

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (2wou.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 2WOU CSU: Contacts of Structural Units for 2WOU Structure Factors (180 Kb) Retrieve 2WOU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WOU from S2C, [Save to disk] Re-refined 2wou structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2WOU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2WOU

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2WOU, from MSDmotif at EBI Fold representative 2wou from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wou_A] SWISS-PROT database: [P36897] Domain organization of [TGFR1_HUMAN] by SWISSPFAM Domain found in 2WOU: [STYKc ] by SMART Alignments of the sequence of 2WOU with the sequences similar proteins can be viewed for 2WOU's classification [TGFR1_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [TGFR1_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 2WOU

Community annotation for 2WOU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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