2WR5 Viral Protein date Aug 29, 2009
title Structure Of Influenza H2 Duck Ontario Hemagglutinin
authors J.Liu, D.J.Stevens, L.F.Haire, P.A.Walker, P.J.Coombs, R.J.Russell, S.J.Gamblin, J.J.Skehel
compound source
Molecule: Hemagglutinin
Chain: A, B, C
 Organism_scientific: Unidentified Influenza Virus
Organism_taxid: 11309
symmetry Space Group: P 21 21 21
R_factor 0.2265 R_Free 0.2612
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.980 150.880 195.560 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.65 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructures of receptor complexes formed by hemagglutinins from the Asian Influenza pandemic of 1957., Liu J, Stevens DJ, Haire LF, Walker PA, Coombs PJ, Russell RJ, Gamblin SJ, Skehel JJ, Proc Natl Acad Sci U S A. 2009 Oct 6;106(40):17175-80. Epub 2009 Sep 28. PMID:19805083
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (497 Kb) [Save to disk]
  • Biological Unit Coordinates (2wr5.pdb1.gz) 488 Kb
  • CSU: Contacts of Structural Units for 2WR5
  • Structure Factors (520 Kb)
  • Retrieve 2WR5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WR5 from S2C, [Save to disk]
  • Re-refined 2wr5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2WR5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2WR5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WR5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wr5_B] [2wr5] [2wr5_C] [2wr5_A]
  • SWISS-PROT database: [D0VWP9]
  • Domain organization of [D0VWP9_9ORTO] by SWISSPFAM
    • Other resources with information on 2WR5
  • Community annotation for 2WR5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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