2WVT	Hydrolase	date	Oct 20, 2009
title	Crystal Structure Of An Alpha-L-Fucosidase Gh29 From Bactero Thetaiotaomicron In Complex With A Novel Iminosugar Fucosid Inhibitor
authors	A.Lammerts Van Bueren, A.Ardevol, J.Fayers-Kerr, B.Luo, Y.Zhang, M.Sollogoub, Y.Bleriot, C.Rovira, G.J.Davies
compound		source
Molecule: Alpha-L-Fucosidase Chain: A, B Fragment: Residues 31-473 Engineered: Yes		Organism_scientific: Bacteroides Thetaiotaomicron Organism_taxid: 226186 Strain: Vpi-5482 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_plasmid: Pet28
symmetry	Space Group: I 1 2 1	R_factor 0.207 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.830 85.160 121.285 90.00 108.73 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	FHN, GOL, IMD	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Analysis of the Reaction Coordinate of alpha-l-Fucosidases: A Combined Structural and Quantum Mechanical Approach., Lammerts van Bueren A, Fayers-Kerr J, Luo B, Zhang Y, Sollogoub M, Bleriot Y, Rovira C, Davies GJ, J Am Chem Soc. 2010 Jan 21. PMID:20092273

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (2wvt.pdb1.gz) 151 Kb LPC: Ligand-Protein Contacts for 2WVT CSU: Contacts of Structural Units for 2WVT Structure Factors (758 Kb) Retrieve 2WVT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2WVT from S2C, [Save to disk] Re-refined 2wvt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 2WVT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2WVT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2wvt_B] [2wvt_A] [2wvt] SWISS-PROT database: [Q8A3I4] Domain organization of [Q8A3I4_BACTN] by SWISSPFAM Domain found in 2WVT: [Alpha_L_fucos ] by SMART

Other resources with information on 2WVT

Community annotation for 2WVT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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