2WWR Oxidoreductase date Oct 26, 2009
title Crystal Structure Of Human Glyoxylate Reductase Hydroxypyruv Reductase
authors M.P.S.Booth, R.Conners, G.Rumsby, R.L.Brady
compound source
Molecule: Glyoxylate Reductasehydroxypyruvate Reductase
Chain: A, B, C, D
Ec: 1.1.1.79
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta
Expression_system_plasmid: Ptrchisb
symmetry Space Group: P 21 21 21
R_factor 0.21739 R_Free 0.27857
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.356 116.080 198.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.82 Å
ligand MG enzyme Oxidoreductase E.C.1.1.1.79 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural basis of substrate specificity in human glyoxylate reductase/hydroxypyruvate reductase., Booth MP, Conners R, Rumsby G, Brady RL, J Mol Biol. 2006 Jun 30;360(1):178-89. Epub 2006 May 22. PMID:16756993
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (2wwr.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (2wwr.pdb2.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 2WWR
  • CSU: Contacts of Structural Units for 2WWR
  • Structure Factors (273 Kb)
  • Retrieve 2WWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WWR from S2C, [Save to disk]
  • Re-refined 2wwr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WWR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WWR, from MSDmotif at EBI
  • Fold representative 2wwr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wwr_A] [2wwr_C] [2wwr_B] [2wwr] [2wwr_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2WWR
  • Community annotation for 2WWR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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