2X5Q Crystal Structure of Hypothetical protein sso1986 from Sulfolobus solfataricus P2 date
authors Oke, M., Carter, L., Johnson, K.A., Kerou, M., Liu, H., Mcmahon, S., Naismith, J.H., White, M.F.
compound source
symmetry
R_factor
R_Free 0.22682
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Scottish Structural Proteomics Facility: targets, methods and outputs., Oke M, Carter LG, Johnson KA, Liu H, McMahon SA, Yan X, Kerou M, Weikart ND, Kadi N, Sheikh MA, Schmelz S, Dorward M, Zawadzki M, Cozens C, Falconer H, Powers H, Overton IM, van Niekerk CA, Peng X, Patel P, Garrett RA, Prangishvili D, Botting CH, Coote PJ, Dryden DT, Barton GJ, Schwarz-Linek U, Challis GL, Taylor GL, White MF, Naismith JH, J Struct Funct Genomics. 2010 Jun;11(2):167-80. Epub 2010 Apr 24. PMID:20419351
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (2x5q.pdb1.gz) 128 Kb
  • CSU: Contacts of Structural Units for 2X5Q
  • Structure Factors (290 Kb)
  • Retrieve 2X5Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X5Q from S2C, [Save to disk]
  • Re-refined 2x5q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2X5Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2X5Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X5Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x5q_B] [2x5q_A] [2x5q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2X5Q
  • Community annotation for 2X5Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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