2X7C Cell Cycle date Feb 26, 2010
title Crystal Structure Of Human Kinesin Eg5 In Complex With (S)-E
authors H.Y.K.Kaan, V.Ulaganathan, O.Rath, C.Laggner, H.Prokopcova, D.Dal C.O.Kappe, F.Kozielski
compound source
Molecule: Kinesin-Like Protein Kif11
Chain: A, B
Fragment: Motor Domain, Residues 1-368
Synonym: Kinesin-Related Motor Protein Eg5, Kinesin-Like Sp Protein Hksp, Thyroid Receptor-Interacting Protein 5, Kines Protein 1, Trip-5;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_plasmid: Plyss
symmetry Space Group: P 21 21 21
R_factor 0.163 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.620 79.760 159.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ADP, KZ9, MG BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis for Inhibition of Eg5 by Dihydropyrimidines: Stereoselectivity of Antimitotic Inhibitors Enastron, Dimethylenastron and Fluorastrol., Kaan HY, Ulaganathan V, Rath O, Prokopcova H, Dallinger D, Kappe CO, Kozielski F, J Med Chem. 2010 Jul 2. PMID:20597485
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (2x7c.pdb1.gz) 124 Kb
  • Biological Unit Coordinates (2x7c.pdb2.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 2X7C
  • CSU: Contacts of Structural Units for 2X7C
  • Structure Factors (941 Kb)
  • Retrieve 2X7C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X7C from S2C, [Save to disk]
  • Re-refined 2x7c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2X7C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2X7C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X7C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x7c] [2x7c_B] [2x7c_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2X7C: [KISc ] by SMART
  • Other resources with information on 2X7C
  • Community annotation for 2X7C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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