2X9E Transferase date Mar 17, 2010
title Human Mps1 In Complex With Nms-P715
authors R.Colombo, M.Caldarelli, M.Mennecozzi, M.L.Giorgini, F.Sola, P.Ca C.Perrera, S.R.Depaolini, L.Rusconi, U.Cucchi, N.Avanzi, J.A.Ber R.T.Bossi, E.Pesenti, A.Galvani, A.Isacchi, F.Colotta, D.Donati,
compound source
Molecule: Dual Specificity Protein Kinase Ttk
Chain: A
Fragment: Kinase Domain 514-828
Synonym: Mps1, Phosphotyrosine Picked Threonine-Protein Kin
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_cell_line: High Five
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pvlgstg
symmetry Space Group: C 2 2 21
R_factor 0.215 R_Free 0.306
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.665 113.362 72.485 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.10 Å
ligand SVE BindingDB enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTargeting the Mitotic Checkpoint for Cancer Therapy with NMS-P715, an Inhibitor of MPS1 Kinase., Colombo R, Caldarelli M, Mennecozzi M, Giorgini ML, Sola F, Cappella P, Perrera C, Depaolini SR, Rusconi L, Cucchi U, Avanzi N, Bertrand JA, Bossi RT, Pesenti E, Galvani A, Isacchi A, Colotta F, Donati D, Moll J, Cancer Res. 2010 Dec 15;70(24):10255-64. PMID:21159646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2x9e.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 2X9E
  • CSU: Contacts of Structural Units for 2X9E
  • Structure Factors (56 Kb)
  • Retrieve 2X9E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X9E from S2C, [Save to disk]
  • Re-refined 2x9e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2X9E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2X9E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X9E, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x9e_A] [2x9e]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2X9E: [S_TKc ] by SMART
  • Other resources with information on 2X9E
  • Community annotation for 2X9E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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