2XA0 Apoptosis date Mar 25, 2010
title Crystal Structure Of Bcl-2 In Complex With A Bax Bh3 Peptide
authors B.Ku, B.H.Oh
compound source
Molecule: Apoptosis Regulator Bcl-2
Chain: A, B
Fragment: Residues 1-207
Synonym: Bcl-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Rig
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproex Hta

Molecule: Apoptosis Regulator Bax
Chain: C, D
Fragment: Bh3 Domain, Residues 52-82
Synonym: Bax

Synthetic: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
symmetry Space Group: P 31 2 1
R_factor 0.2223 R_Free 0.2422
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.973 81.973 138.850 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
Primary referenceEvidence that inhibition of BAX activation by BCL-2 involves its tight and preferential interaction with the BH3 domain of BAX., Ku B, Liang C, Jung JU, Oh BH, Cell Res. 2010 Nov 9. PMID:21060336
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2xa0.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (2xa0.pdb2.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2XA0
  • Structure Factors (119 Kb)
  • Retrieve 2XA0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XA0 from S2C, [Save to disk]
  • Re-refined 2xa0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XA0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XA0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2XA0, from MSDmotif at EBI
  • Fold representative 2xa0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xa0_A] [2xa0] [2xa0_D] [2xa0_C] [2xa0_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 2XA0: [BCL] [BH4 ] by SMART
  • Other resources with information on 2XA0
  • Community annotation for 2XA0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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