2XNY	Cell Adhesion	date	Aug 06, 2010
title	A Fragment Of Streptococcal M1 Protein In Complex With Human Fibrinogen
authors	P.Macheboeuf, C.Y Fu, A.S.Zinkernagel, J.E.Johnson, V.Nizet, P.Gh
compound		source
Molecule: Fibrinogen Alpha Chain Chain: A, D Fragment: Fragment D, Residues 130-216 Synonym: Fibrinopeptide A, Human Fibrinogen		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Fibrinogen Beta Chain Chain: B, E Fragment: Fragment D, Residues 164-491 Synonym: Human Fibrinogen, Fibrinopeptide B		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Fibrinogen Gamma Chain Chain: C, F Fragment: Fragment D, Residues 114-432 Synonym: Human Fibrinogen		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: M Protein Chain: M, N Fragment: N-Terminal Fragment, Residues 42-134 Engineered: Yes		Organism_scientific: Streptococcus Pyogenes Organism_taxid: 1314 Strain: 5448 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28b
symmetry	Space Group: P 32 2 1	R_factor 0.424 R_Free 0.408
crystal cell	length a length b length c angle alpha angle beta angle gamma 165.687 165.687 289.652 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	7.50 Å
Gene Ontology	Chain Function Process Component A, D E, B F, C
Primary reference	Streptococcal M1 protein constructs a pathological host fibrinogen network., Macheboeuf P, Buffalo C, Fu CY, Zinkernagel AS, Cole JN, Johnson JE, Nizet V, Ghosh P, Nature. 2011 Apr 7;472(7341):64-8. PMID:21475196

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk] Biological Unit Coordinates (2xny.pdb1.gz) 104 Kb Biological Unit Coordinates (2xny.pdb2.gz) 104 Kb Biological Unit Coordinates (2xny.pdb3.gz) 15 Kb CSU: Contacts of Structural Units for 2XNY Structure Factors (79 Kb) Retrieve 2XNY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XNY from S2C, [Save to disk] Re-refined 2xny structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XNY in 3D

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Visual 3D analysis of 2XNY

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XNY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xny_C] [2xny_M] [2xny_F] [2xny_E] [2xny_A] [2xny_D] [2xny] [2xny_N] [2xny_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XNY: [FBG ] by SMART

Other resources with information on 2XNY

Community annotation for 2XNY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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