2XR5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 07B, CA, CL, ETA, MAN enzyme
Primary referenceStructure of a glycomimetic ligand in the carbohydrate recognition domain of C-type lectin DC-SIGN. Structural requirements for selectivity and ligand design., Thepaut M, Guzzi C, Sutkeviciute I, Sattin S, Ribeiro-Viana R, Varga N, Chabrol E, Rojo J, Bernardi A, Angulo J, Nieto PM, Fieschi F, J Am Chem Soc. 2013 Feb 20;135(7):2518-29. doi: 10.1021/ja3053305. Epub 2013 Feb , 8. PMID:23360500
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (2xr5.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 2XR5
  • CSU: Contacts of Structural Units for 2XR5
  • Structure Factors (181 Kb)
  • Retrieve 2XR5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XR5 from S2C, [Save to disk]
  • Re-refined 2xr5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2XR5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xr5] [2xr5_A]
  • SWISS-PROT database:
  • Domain found in 2XR5: [CLECT ] by SMART

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