2XRP	Structural Protein	date	Sep 18, 2010
title	Human Doublecortin N-Dc Repeat (1mjd) And Mammalian Tubulin 3hke) Docked Into The 8-Angstrom Cryo-Em Map Of Doublecorti Stabilised Microtubules
authors	F.J.Fourniol, C.V.Sindelar, B.Amigues, D.K.Clare, G.Thomas, M.Per F.Francis, A.Houdusse, C.A.Moores
compound		source
Molecule: Tubulin Beta-2b Chain Chain: A, C, E, G Synonym: Tubulin Beta Chain Ec: 3.6.5.6		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Organ: Brain
Molecule: Tubulin Alpha-1d Chain Chain: B, D, F, H Synonym: Tubulin Alpha Chain Ec: 3.6.5.6		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Organ: Brain
Molecule: Neuronal Migration Protein Doublecortin Chain: I Fragment: Residues 46-140 Synonym: Doublecortin, Lissencephalin-X, Lis-X, Doublin Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Brain Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	8.20 Å
ligand	GDP, GTP	enzyme	Hydrolase E.C.3.6.5.6 BRENDA
Gene Ontology	Chain Function Process Component A, E, C, G F, B, H, D I
Primary reference	Template-free 13-protofilament microtubule-MAP assembly visualized at 8 A resolution., Fourniol FJ, Sindelar CV, Amigues B, Clare DK, Thomas G, Perderiset M, Francis F, Houdusse A, Moores CA, J Cell Biol. 2010 Nov 1;191(3):463-70. Epub 2010 Oct 25. PMID:20974813

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (555 Kb) [Save to disk] Biological Unit Coordinates (2xrp.pdb1.gz) 547 Kb LPC: Ligand-Protein Contacts for 2XRP CSU: Contacts of Structural Units for 2XRP Retrieve 2XRP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XRP from S2C, [Save to disk]

View 2XRP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XRP

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XRP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xrp_E] [2xrp_G] [2xrp_A] [2xrp] [2xrp_B] [2xrp_D] [2xrp_I] [2xrp_C] [2xrp_F] [2xrp_H] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 2XRP: [DCX] [Tubulin] [Tubulin_C ] by SMART

Other resources with information on 2XRP

Community annotation for 2XRP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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