2XS0	Transcription	date	Sep 24, 2010
title	Linear Binding Motifs For Jnk And For Calcineurin Antagonist Control The Nuclear Shuttling Of Nfat4
authors	T.Barkai, I.Toeoroe, A.Garai, A.Remenyi
compound		source
Molecule: Mitogen-Activated Protein Kinase 8 Chain: A Synonym: Map Kinase 8, Mapk 8, Stress-Activated Protein Kin Jnk1, C-Jun N-Terminal Kinase 1, Jnk-46, Stress-Activated P Kinase 1; Ec: 2.7.11.24 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pet Derivative
Molecule: Nuclear Factor Of Activated T-Cells, Cytoplasmic Chain: B Fragment: Fragment Of Nfat4, Residues 141-154 Synonym: Nf-Atc3, T-Cell Transcription Factor Nfat4, Nfatx Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 2 2 21	R_factor 0.188 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.530 106.550 130.910 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	ANP	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove., Garai A, Zeke A, Gogl G, Toro I, Fordos F, Blankenburg H, Barkai T, Varga J, Alexa A, Emig D, Albrecht M, Remenyi A, Sci Signal. 2012 Oct 9;5(245):ra74. doi: 10.1126/scisignal.2003004. PMID:23047924

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk] Biological Unit Coordinates (2xs0.pdb1.gz) 119 Kb LPC: Ligand-Protein Contacts for 2XS0 CSU: Contacts of Structural Units for 2XS0 Structure Factors (100 Kb) Retrieve 2XS0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XS0 from S2C, [Save to disk] Re-refined 2xs0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XS0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XS0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XS0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xs0_B] [2xs0] [2xs0_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XS0: [S_TKc ] by SMART

Other resources with information on 2XS0

Community annotation for 2XS0 at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---