2XUB Transcription date Oct 18, 2010
title Human Rpc62 Subunit Structure
authors S.Lefevre, P.Legrand, S.Fribourg
compound source
Molecule: Dna-Directed Rna Polymerase III Subunit Rpc3
Chain: A
Synonym: Rna Polymerase III Subunit C3, Dna-Directed Rna Po III Subunit C, Rna Polymerase III 62 Kda Subunit, Rpc62, H
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.1884 R_Free 0.2298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
161.790 69.380 75.400 90.00 113.20 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-function analysis of hRPC62 provides insights into RNA polymerase III transcription initiation., Lefevre S, Dumay-Odelot H, El-Ayoubi L, Budd A, Legrand P, Pinaud N, Teichmann M, Fribourg S, Nat Struct Mol Biol. 2011 Mar;18(3):352-8. Epub 2011 Feb 27. PMID:21358628
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (2xub.pdb1.gz) 215 Kb
  • CSU: Contacts of Structural Units for 2XUB
  • Structure Factors (256 Kb)
  • Retrieve 2XUB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XUB from S2C, [Save to disk]
  • Re-refined 2xub structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2XUB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2XUB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XUB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xub] [2xub_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2XUB
  • Community annotation for 2XUB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science