2XVL	Hydrolase	date	Oct 26, 2010
title	Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio In Complex With Pentaerythritol Propoxylate (5 4 Po Oh)
authors	J.Larsbrink, A.Izumi, F.Ibatullin, A.Nakhai, H.J.Gilbert, G.J.Dav H.Brumer
compound		source
Molecule: Alpha-Xylosidase, Putative, Xyl31a Chain: A Synonym: Alpha Xylosidase Ec: 3.2.1.- Engineered: Yes		Organism_scientific: Cellvibrio Japonicus Organism_taxid: 155077 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet-Dest42
symmetry	Space Group: P 63 2 2	R_factor 0.145 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 157.653 157.653 226.688 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	CL, NI, PXN, SO4	enzyme	Hydrolase E.C.3.2.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and enzymatic characterisation of a Glycoside Hydrolase Family 31 alphaxylosidase from Cellvibrio japonicus involved in xyloglucan saccharification., Larsbrink J, Izumi A, Ibatullin F, Nakhai A, Gilbert HJ, Davies GJ, Brumer H, Biochem J. 2011 Mar 22. PMID:21426303

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (329 Kb) [Save to disk] Biological Unit Coordinates (2xvl.pdb1.gz) 322 Kb LPC: Ligand-Protein Contacts for 2XVL CSU: Contacts of Structural Units for 2XVL Structure Factors (596 Kb) Retrieve 2XVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XVL from S2C, [Save to disk] Re-refined 2xvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XVL in 3D

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Visual 3D analysis of 2XVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XVL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xvl] [2xvl_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XVL: [PA14 ] by SMART

Other resources with information on 2XVL

Community annotation for 2XVL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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