2XVQ Transport Protein date Oct 27, 2010
title Human Serum Albumin Complexed With Dansyl-L-Sarcosine
authors A.J.Ryan, S.Curry
compound source
Molecule: Serum Albumin
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
symmetry Space Group: P 1
R_factor 0.220 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.485 55.355 120.738 81.15 90.21 65.01
method X-Ray Diffractionresolution 2.90 Å
ligand 9DS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • antioxidant activity


  • Primary referenceStructural basis of binding of fluorescent, site-specific dansylated amino acids to human serum albumin., Ryan AJ, Ghuman J, Zunszain PA, Chung CW, Curry S, J Struct Biol. 2010 Oct 18. PMID:20940056
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (2xvq.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (2xvq.pdb2.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 2XVQ
  • CSU: Contacts of Structural Units for 2XVQ
  • Structure Factors (270 Kb)
  • Retrieve 2XVQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XVQ from S2C, [Save to disk]
  • Re-refined 2xvq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XVQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XVQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XVQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xvq_A] [2xvq] [2xvq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XVQ: [ALBUMIN ] by SMART
  • Other resources with information on 2XVQ
  • Community annotation for 2XVQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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