2XVW Transport Protein date Oct 28, 2010
title Human Serum Albumin Complexed With Dansyl-L-Arginine And Myristic Acid
authors J.Ghuman, S.Curry
compound source
Molecule: Serum Albumin
Chain: A
Synonym: Human Serum Albumin
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
symmetry Space Group: C 1 2 1
R_factor 0.191 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
187.080 38.760 95.730 90.00 105.64 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand 9NR, MYR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of binding of fluorescent, site-specific dansylated amino acids to human serum albumin., Ryan AJ, Ghuman J, Zunszain PA, Chung CW, Curry S, J Struct Biol. 2010 Oct 18. PMID:20940056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (2xvw.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 2XVW
  • CSU: Contacts of Structural Units for 2XVW
  • Structure Factors (141 Kb)
  • Retrieve 2XVW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XVW from S2C, [Save to disk]
  • Re-refined 2xvw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XVW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XVW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2XVW, from MSDmotif at EBI
  • Fold representative 2xvw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xvw] [2xvw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XVW: [ALBUMIN ] by SMART
  • Other resources with information on 2XVW
  • Community annotation for 2XVW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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