2XWE Hydrolase date Nov 02, 2010
title X-Ray Structure Of Acid-Beta-Glucosidase With 5n,6s-(N'-(N- Octyl)Imino)-6-Thionojirimycin In The Active Site
authors B.Brumshtein, M.Aguilar-Moncayo, J.M.Benito, C.Ortiz Mellet, J.M.Garcia Fernandez, I.Silman, Y.Shaaltiel, J.L.Sussman, A.H.F
compound source
Molecule: Glucosylceramidase
Chain: A, B
Synonym: Acid-Beta-Glucosidase, Alglucerase, Beta-Glucocerebrosidase, D-Glucosyl-N-Acylsphingosine Glucohydrolase, Imiglucerase;
Ec: 3.2.1.45
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Daucus Carota
Expression_system_common: Carrot
Expression_system_taxid: 4039
symmetry Space Group: P 1 21 1
R_factor 0.14994 R_Free 0.21337
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.142 96.693 82.970 90.00 102.84 90.00
method X-Ray Diffractionresolution 2.31 Å
ligand AMF, BMA, FUC, K, NAG, PO4 enzyme Hydrolase E.C.3.2.1.45 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • negative regulation of inter...

  • Primary referenceCyclodextrin-mediated crystallization of acid beta-glucosidase in complex with amphiphilic bicyclic nojirimycin analogues., Brumshtein B, Aguilar-Moncayo M, Benito JM, Garcia Fernandez JM, Silman I, Shaaltiel Y, Aviezer D, Sussman JL, Futerman AH, Ortiz Mellet C, Org Biomol Chem. 2011 Jun 7;9(11):4160-7. Epub 2011 Apr 11. PMID:21483943
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (2xwe.pdb1.gz) 87 Kb
  • Biological Unit Coordinates (2xwe.pdb2.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 2XWE
  • CSU: Contacts of Structural Units for 2XWE
  • Structure Factors (625 Kb)
  • Retrieve 2XWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XWE from S2C, [Save to disk]
  • Re-refined 2xwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2XWE, from MSDmotif at EBI
  • Fold representative 2xwe from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xwe] [2xwe_B] [2xwe_A]
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