2XZE Hydrolase Protein Transport date Nov 25, 2010
title Structural Basis For Amsh-Escrt-III Chmp3 Interaction
authors J.Solomons, C.Sabin, W.Weissenhorn
compound source
Molecule: Stam-Binding Protein
Chain: A, B
Fragment: Mit Domain, Residues 1-146
Synonym: Associated Molecule With The Sh3 Domain Of Stam, Endosome-Associated Ubiquitin Isopeptidase;
Ec: 3.4.19.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pproexhta Invitrogen

Molecule: Charged Multivesicular Body Protein 3
Chain: Q, R
Fragment: C-Term Fragment, Residues 183-222
Synonym: Chromatin-Modifying Protein 3, Neuroendocrine Differentiation Factor, Vacuolar Protein Sorting-Associate Protein 24, Hvps24, Chmp3;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pbadm-41 His-Mbp Fusion Protein W Protease Cleavage Site
symmetry Space Group: P 41
R_factor 0.19163 R_Free 0.22694
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.970 45.970 206.910 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand
enzyme Hydrolase E.C.3.4.19 BRENDA
Primary referenceStructural Basis for ESCRT-III CHMP3 Recruitment of AMSH., Solomons J, Sabin C, Poudevigne E, Usami Y, Hulsik DL, Macheboeuf P, Hartlieb B, Gottlinger H, Weissenhorn W, Structure. 2011 Aug 10;19(8):1149-59. PMID:21827950
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (2xze.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (2xze.pdb2.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2XZE
  • Structure Factors (2130 Kb)
  • Retrieve 2XZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XZE from S2C, [Save to disk]
  • Re-refined 2xze structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XZE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2XZE, from MSDmotif at EBI
  • Fold representative 2xze from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xze_Q] [2xze_A] [2xze_B] [2xze] [2xze_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2XZE
  • Community annotation for 2XZE at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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