2XZR Cell Adhesion date Nov 28, 2010
title Escherichia Coli Immunoglobulin-Binding Protein Eibd 391-438 Gcn4 Adaptors
authors M.D.Hartmann, B.Hernandez Alvarez, O.Ridderbusch, S.Deiss, A.N.L
compound source
Molecule: Immunoglobulin-Binding Protein Eibd
Chain: A
Fragment: Residues 391-438
Engineered: Yes
Other_details: N- And C-Terminal In-Register Fusion To Gcn4
 Organism_scientific: Enterobacteria Phage P-Eibd
Organism_taxid: 120163
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3 2 1
R_factor 0.260 R_Free 0.308
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.670 36.670 228.580 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand CL enzyme
Primary referenceThe Structure of E. coli IgG-Binding Protein D Suggests a General Model for Bending and Binding in Trimeric Autotransporter Adhesins., Leo JC, Lyskowski A, Hattula K, Hartmann MD, Schwarz H, Butcher SJ, Linke D, Lupas AN, Goldman A, Structure. 2011 Jul 13;19(7):1021-30. PMID:21742268
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (2xzr.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 2XZR
  • CSU: Contacts of Structural Units for 2XZR
  • Structure Factors (63 Kb)
  • Retrieve 2XZR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XZR from S2C, [Save to disk]
  • Re-refined 2xzr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2XZR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2XZR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XZR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xzr] [2xzr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XZR: [BAG ] by SMART
    • Other resources with information on 2XZR
  • Community annotation for 2XZR at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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