2Y01 TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102) date
authors Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.
compound source
symmetry
R_factor
R_Free 0.26636
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand 2CV, Y00, Y01 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe structural basis for agonist and partial agonist action on a beta(1)-adrenergic receptor., Warne T, Moukhametzianov R, Baker JG, Nehme R, Edwards PC, Leslie AG, Schertler GF, Tate CG, Nature. 2011 Jan 13;469(7329):241-4. PMID:21228877
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (2y01.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (2y01.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (2y01.pdb3.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 2Y01
  • CSU: Contacts of Structural Units for 2Y01
  • Structure Factors (238 Kb)
  • Retrieve 2Y01 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y01 from S2C, [Save to disk]
  • Re-refined 2y01 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2Y01 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2Y01
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2Y01, from MSDmotif at EBI
  • Fold representative 2y01 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y01_B] [2y01_A] [2y01]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2Y01
  • Community annotation for 2Y01 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science