2Y0I	Oxidoreductase Peptide	date	Dec 02, 2010
title	Factor Inhibiting Hif-1 Alpha In Complex With Tankyrase-2 (T Fragment Peptide (21-Mer)
authors	R.Chowdhury, M.A.Mcdonough, C.J.Schofield
compound		source
Molecule: Hypoxia-Inducible Factor 1-Alpha Inhibitor Chain: A Synonym: Factor Inhibiting Hif-1, Fih-1, Hypoxia-Inducible Asparagine Hydroxylase; Ec: 1.14.11.16 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet28a
Molecule: Tankyrase-2 Chain: S Fragment: Tnks2 Fragment Peptide, Residues 538-558 Synonym: Tank2, Poly [Adp-Ribose] Polymerase 5b, Tnks-2, Tr Interacting Ankyrin-Related Adp-Ribose Polymerase 2, Tankyr Tankyrase-Like Protein, Tankyrase-Related Protein; Ec: 2.4.2.30 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 41 21 2	R_factor 0.230 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.490 86.490 146.710 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.28 Å
ligand	AKG, FE2, GOL, SO4	enzyme	Oxidoreductase E.C.1.14.11.16 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Factor-Inhibiting Hypoxia-Inducible Factor (FIH) Catalyses the Posttranslational Hydroxylation of Histidinyl Residues within Ankyrin Repeat Domains., Yang M, Chowdhury R, Ge W, Hamed RB, McDonough MA, Claridge TD, Kessler BM, Cockman ME, Ratcliffe PJ, Schofield CJ, FEBS J. 2011 Jan 20. doi: 10.1111/j.1742-4658.2011.08022.x. PMID:21251231

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (2y0i.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 2Y0I CSU: Contacts of Structural Units for 2Y0I Structure Factors (320 Kb) Retrieve 2Y0I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y0I from S2C, [Save to disk] Re-refined 2y0i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y0I in 3D

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Visual 3D analysis of 2Y0I

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2Y0I, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y0i] [2y0i_A] [2y0i_S] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2Y0I: [JmjC ] by SMART

Other resources with information on 2Y0I

Community annotation for 2Y0I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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