2Y5B		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GLZ, SO4, ZN	enzyme
note	2Y5B is a representative structure
Gene Ontology	Chain Function Process Component E, A
Primary reference	Polyubiquitin binding and cross-reactivity in the USP domain deubiquitinase USP21., Ye Y, Akutsu M, Reyes-Turcu F, Enchev RI, Wilkinson KD, Komander D, EMBO Rep. 2011 Apr;12(4):350-7. Epub 2011 Mar 11. PMID:21399617

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk] Biological Unit Coordinates (2y5b.pdb1.gz) 70 Kb Biological Unit Coordinates (2y5b.pdb2.gz) 74 Kb LPC: Ligand-Protein Contacts for 2Y5B CSU: Contacts of Structural Units for 2Y5B Structure Factors (1294 Kb) Retrieve 2Y5B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y5B from S2C, [Save to disk] Re-refined 2y5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y5B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y5b] [2y5b_A] [2y5b_B] [2y5b_E] [2y5b_F] SWISS-PROT database: Domain found in 2Y5B: [UBQ ] by SMART

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