2Y7G	Lyase	date	Jan 31, 2011
title	Crystal Structure Of The 3-Keto-5-Aminohexanoate Cleavage En From C. Cloacamonas Acidaminovorans In Complex With The Pro Acetoacetate
authors	M.Bellinzoni, P.M.Alzari
compound		source
Molecule: 3-Keto-5-Aminohexanoate Cleavage Enzyme Chain: A, B Fragment: Residues 2-276 Engineered: Yes		Organism_scientific: Candidatus Cloacamonas Acidaminovorans Organism_taxid: 456827 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcrt7ct-Topo
symmetry	Space Group: P 43 21 2	R_factor 0.167 R_Free 0.186
crystal cell	length a length b length c angle alpha angle beta angle gamma 102.100 102.100 100.736 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	AAE, GOL, MG, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	3-keto-5-aminohexanoate cleavage enzyme: a common fold for an uncommon Claisen-type condensation., Bellinzoni M, Bastard K, Perret A, Zaparucha A, Perchat N, Vergne C, Wagner T, de Melo-Minardi RC, Artiguenave F, Cohen GN, Weissenbach J, Salanoubat M, Alzari PM, J Biol Chem. 2011 Jun 1. PMID:21632536

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (185 Kb) [Save to disk] Biological Unit Coordinates (2y7g.pdb1.gz) 352 Kb LPC: Ligand-Protein Contacts for 2Y7G CSU: Contacts of Structural Units for 2Y7G Structure Factors (4983 Kb) Retrieve 2Y7G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y7G from S2C, [Save to disk] Re-refined 2y7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y7G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2Y7G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2Y7G, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y7g_A] [2y7g] [2y7g_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2Y7G

Community annotation for 2Y7G at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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