2Y92 Immune System date Feb 11, 2011
title Crystal Structure Of Mal Adaptor Protein
authors E.Valkov, A.Stamp, J.L.Martin, B.Kobe
compound source
Molecule: Tollinterleukin-1 Receptor Domain-Containing Ada Protein,;
Chain: A
Fragment: Tir Domain, Residues 79-221
Synonym: Tir Domain-Containing Adapter Protein, Adaptor Pro Wyatt, Myd88 Adapter-Like Protein, Mal;
Engineered: Yes
Other_details: C91 And C157 Modified By Dithiothreitol (Dtt
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 43 21 2
R_factor 0.2300 R_Free 0.2506
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.146 88.146 78.793 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.01 Å
ligand DTT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Toll-like receptor adaptor MAL/TIRAP reveals the molecular basis for signal transduction and disease protection., Valkov E, Stamp A, Dimaio F, Baker D, Verstak B, Roversi P, Kellie S, Sweet MJ, Mansell A, Gay NJ, Martin JL, Kobe B, Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14879-84. Epub 2011 Aug 22. PMID:21873236
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2y92.pdb1.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 2Y92
  • CSU: Contacts of Structural Units for 2Y92
  • Structure Factors (124 Kb)
  • Retrieve 2Y92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y92 from S2C, [Save to disk]
  • Re-refined 2y92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Y92 in 3D
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  • Visual 3D analysis of 2Y92
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2Y92, from MSDmotif at EBI
  • Fold representative 2y92 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y92_A] [2y92]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2Y92
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