2Y96 Hydrolase date Feb 11, 2011
title Structure Of Human Dual-Specificity Phosphatase 27
authors G.T.Lountos, J.E.Tropea, D.S.Waugh
compound source
Molecule: Dual Specificity Phosphatase Dupd1
Chain: A, B
Fragment: Residues 2-220
Synonym: Human Dual-Specificity Phosphatase 27
Ec: 3.1.3.16, 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta2
Expression_system_plasmid: Pjt154
symmetry Space Group: P 64 2 2
R_factor 0.20139 R_Free 0.22482
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.012 126.012 125.758 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.38 Å
ligand SO4 enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein tyrosine phosphatase...


  • Primary referenceStructure of human dual-specificity phosphatase 27 at 2.38 A resolution., Lountos GT, Tropea JE, Waugh DS, Acta Crystallogr D Biol Crystallogr. 2011 May;67(Pt 5):471-9. Epub 2011, Apr 16. PMID:21543850
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (2y96.pdb1.gz) 239 Kb
  • LPC: Ligand-Protein Contacts for 2Y96
  • CSU: Contacts of Structural Units for 2Y96
  • Structure Factors (317 Kb)
  • Retrieve 2Y96 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y96 from S2C, [Save to disk]
  • Re-refined 2y96 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 2Y96
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2Y96, from MSDmotif at EBI
  • Fold representative 2y96 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y96] [2y96_A] [2y96_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2Y96: [DSPc ] by SMART
  • Other resources with information on 2Y96
  • Community annotation for 2Y96 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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