2YDP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AHR, CA, EDG	enzyme
Gene Ontology	Chain Function Process Component B, A, C
Primary reference	alpha-L-Arabinofuranosylated pyrrolidines as arabinanase inhibitors., Goddard-Borger ED, Carapito R, Jeltsch JM, Phalip V, Stick RV, Varrot A, Chem Commun (Camb). 2011 Sep 14;47(34):9684-6. Epub 2011 Jul 20. PMID:21773614

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk] Biological Unit Coordinates (2ydp.pdb1.gz) 66 Kb Biological Unit Coordinates (2ydp.pdb2.gz) 64 Kb Biological Unit Coordinates (2ydp.pdb3.gz) 64 Kb LPC: Ligand-Protein Contacts for 2YDP CSU: Contacts of Structural Units for 2YDP Structure Factors (2052 Kb) Retrieve 2YDP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YDP from S2C, [Save to disk] Re-refined 2ydp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YDP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ydp] [2ydp_A] [2ydp_B] [2ydp_C] SWISS-PROT database:

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