2YGY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	1PE, CL	enzyme
Gene Ontology	Chain Function Process Component B, C, A, D
Primary reference	Pathological macromolecular crystallographic data affected by twinning, partial-disorder and exhibiting multiple lattices for testing of data processing and refinement tools., Campeotto I, Lebedev A, Schreurs AMM, Kroon-Batenburg LMJ, Lowe E, Phillips SEV, Murshudov GN, Pearson AR, Sci Rep. 2018 Oct 5;8(1):14876. doi: 10.1038/s41598-018-32962-6. PMID:30291262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk] Biological Unit Coordinates (2ygy.pdb1.gz) 191 Kb LPC: Ligand-Protein Contacts for 2YGY CSU: Contacts of Structural Units for 2YGY Structure Factors (1581 Kb) Retrieve 2YGY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YGY from S2C, [Save to disk] Re-refined 2ygy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YGY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ygy] [2ygy_A] [2ygy_B] [2ygy_C] [2ygy_D] SWISS-PROT database: Domain found in 2YGY: [DHDPS ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---