2YI7 Chaperone date May 10, 2011
title Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
authors S.M.Roe, C.Prodromou, L.H.Pearl
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Fragment: N-Terminal Domain, Residues 1-229
Synonym: Hsp90, Heat Shock 86 Kda, Hsp 86, Hsp86, Renal Car Antigen Ny-Ren-38;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.17478 R_Free 0.19635
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.230 88.705 99.625 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand BZ8, MG BindingDB enzyme
Primary referenceCo-crystalization and in vitro biological characterization of 5-aryl-4-(5-substituted-2-4-dihydroxyphenyl)-1,2,3-thiadiazole hsp90 inhibitors., Sharp SY, Roe SM, Kazlauskas E, Cikotiene I, Workman P, Matulis D, Prodromou C, PLoS One. 2012;7(9):e44642. Epub 2012 Sep 11. PMID:22984537
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (2yi7.pdb1.gz) 167 Kb
  • LPC: Ligand-Protein Contacts for 2YI7
  • CSU: Contacts of Structural Units for 2YI7
  • Structure Factors (755 Kb)
  • Retrieve 2YI7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YI7 from S2C, [Save to disk]
  • Re-refined 2yi7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YI7 in 3D
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  • Visual 3D analysis of 2YI7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YI7, from MSDmotif at EBI
  • Fold representative 2yi7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yi7] [2yi7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2YI7: [HATPase_c ] by SMART
  • Other resources with information on 2YI7
  • Community annotation for 2YI7 at PDBWiki (http://pdbwiki.org)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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