2YID date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, MG, TD7 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, C, A


Primary referenceFunctional plasticity and allosteric regulation of alpha-ketoglutarate decarboxylase in central mycobacterial metabolism., Wagner T, Bellinzoni M, Wehenkel A, O'Hare HM, Alzari PM, Chem Biol. 2011 Aug 26;18(8):1011-20. PMID:21867916
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1078 Kb) [Save to disk]
  • Biological Unit Coordinates (2yid.pdb1.gz) 534 Kb
  • Biological Unit Coordinates (2yid.pdb2.gz) 543 Kb
  • LPC: Ligand-Protein Contacts for 2YID
  • CSU: Contacts of Structural Units for 2YID
  • Structure Factors (7039 Kb)
  • Retrieve 2YID in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YID from S2C, [Save to disk]
  • Re-refined 2yid structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YID in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yid] [2yid_A] [2yid_B] [2yid_C] [2yid_D]
  • SWISS-PROT database:
  • Domain found in 2YID: [Transket_pyr ] by SMART

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