2YIM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, MC4, PO4	enzyme
Gene Ontology	Chain Function Process Component B, D, A, C
Primary reference	The Enolization Chemistry of a Thioester-Dependent Racemase: The 1.4 A Crystal Structure of a Reaction Intermediate Complex Characterized by Detailed QM/MM Calculations., Sharma S, Bhaumik P, Schmitz W, Venkatesan R, Hiltunen JK, Conzelmann E, Juffer AH, Wierenga RK, J Phys Chem B. 2012 Mar 22;116(11):3619-29. Epub 2012 Mar 7. PMID:22360758

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk] Biological Unit Coordinates (2yim.pdb1.gz) 134 Kb Biological Unit Coordinates (2yim.pdb2.gz) 134 Kb LPC: Ligand-Protein Contacts for 2YIM CSU: Contacts of Structural Units for 2YIM Structure Factors (17592 Kb) Retrieve 2YIM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YIM from S2C, [Save to disk] Re-refined 2yim structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YIM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yim] [2yim_A] [2yim_B] [2yim_C] [2yim_D] SWISS-PROT database:

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