2YMD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, PO4, SRO	enzyme
Gene Ontology	Chain Function Process Component C, E, I, A, D, B, G, F, J, H
Primary reference	Structural basis of ligand recognition in 5-HT3 receptors., Kesters D, Thompson AJ, Brams M, van Elk R, Spurny R, Geitmann M, Villalgordo JM, Guskov A, Helena Danielson U, Lummis SC, Smit AB, Ulens C, EMBO Rep. 2012 Nov 30. doi: 10.1038/embor.2012.189. PMID:23196367

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (758 Kb) [Save to disk] Biological Unit Coordinates (2ymd.pdb1.gz) 730 Kb Biological Unit Coordinates (2ymd.pdb2.gz) 368 Kb Biological Unit Coordinates (2ymd.pdb3.gz) 368 Kb LPC: Ligand-Protein Contacts for 2YMD CSU: Contacts of Structural Units for 2YMD Structure Factors (3066 Kb) Retrieve 2YMD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YMD from S2C, [Save to disk] Re-refined 2ymd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YMD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ymd] [2ymd_A] [2ymd_B] [2ymd_C] [2ymd_D] [2ymd_E] [2ymd_F] [2ymd_G] [2ymd_H] [2ymd_I] [2ymd_J] SWISS-PROT database:

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