2YMT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NH2, PDO	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The hepatitis B virus preS1 domain hijacks host trafficking proteins by motif mimicry., Jurgens MC, Voros J, Rautureau GJ, Shepherd DA, Pye VE, Muldoon J, Johnson CM, Ashcroft AE, Freund SM, Ferguson N, Nat Chem Biol. 2013 Jul 14. doi: 10.1038/nchembio.1294. PMID:23851574

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (2ymt.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 2YMT CSU: Contacts of Structural Units for 2YMT Structure Factors (500 Kb) Retrieve 2YMT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YMT from S2C, [Save to disk] Re-refined 2ymt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YMT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ymt] [2ymt_A] [2ymt_B] SWISS-PROT database: Domain found in 2YMT: [Alpha_adaptinC2 ] by SMART

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