2YNP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular Basis for Recognition of Dilysine Trafficking Motifs by COPI., Jackson LP, Lewis M, Kent HM, Edeling MA, Evans PR, Duden R, Owen DJ, Dev Cell. 2012 Nov 20. pii: S1534-5807(12)00480-7. doi:, 10.1016/j.devcel.2012.10.017. PMID:23177648
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (2ynp.pdb1.gz) 97 Kb
  • CSU: Contacts of Structural Units for 2YNP
  • Structure Factors (863 Kb)
  • Retrieve 2YNP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YNP from S2C, [Save to disk]
  • Re-refined 2ynp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YNP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YNP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YNP, from MSDmotif at EBI
  • Fold representative 2ynp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ynp] [2ynp_A] [2ynp_P]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2YNP: [WD40 ] by SMART
  • Other resources with information on 2YNP
  • Community annotation for 2YNP at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science