2YRV Transcription date Apr 03, 2007
title Solution Structure Of The Rbb1nt Domain Of Human Rb(Retinobl Binding Protein 1
authors N.Nameki, K.Saito, S.Koshiba, T.Kigawa, S.Yokoyama, Riken Structu Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: At-Rich Interactive Domain-Containing Protein 4a
Chain: A
Fragment: Unp Region 170-273
Synonym: Arid Domain-Containing Protein 4a, Retinoblastoma- Protein 1, Rbbp-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arid4a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P051025-08
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (604 Kb) [Save to disk]
  • Biological Unit Coordinates (2yrv.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2YRV
  • Retrieve 2YRV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YRV from S2C, [Save to disk]
  • View 2YRV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YRV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2YRV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yrv_A] [2yrv]
  • SWISS-PROT database: [P29374]
  • Domain organization of [ARI4A_HUMAN] by SWISSPFAM
  • Other resources with information on 2YRV
  • Community annotation for 2YRV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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