2YS2 Transferase date Apr 03, 2007
title Solution Structure Of The Btk Motif Of Human Cytoplasmic Tyrosine-Protein Kinase Bmx
authors H.Abe, N.Tochio, T.Tomizawa, S.Koshiba, M.Yoneyama, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Cytoplasmic Tyrosine-Protein Kinase Bmx
Chain: A
Fragment: Btk
Synonym: Bone Marrow Tyrosine Kinase Gene In Chromosome X Protein, Epithelial And Endothelial Tyrosine Kinase, Etk, Ntk38;
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bmx
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050905-12
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (235 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2YS2
  • CSU: Contacts of Structural Units for 2YS2
  • Original NMR restraints for 2YS2 from PDB
  • Retrieve 2YS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YS2 from S2C, [Save to disk]
  • View 2YS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YS2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YS2, from MSDmotif at EBI
  • Fold representative 2ys2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ys2] [2ys2_A]
  • SWISS-PROT database: [P51813]
  • Domain organization of [BMX_HUMAN] by SWISSPFAM
  • Domain found in 2YS2: [BTK ] by SMART
  • Other resources with information on 2YS2
  • Community annotation for 2YS2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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