2YSI Protein Binding date Apr 03, 2007
title Solution Structure Of The First Ww Domain From The Mouse Tra Elongation Regulator 1, Transcription Factor Ca150
authors S.Ohnishi, H.Li, S.Koshiba, T.Harada, S.Watanabe, T.Kigawa, S.Yoko Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Transcription Elongation Regulator 1
Chain: A
Fragment: Ww Domain
Synonym: Tata Box-Binding Protein-Associated Factor 2s, Tra Factor Ca150, P144, Formin-Binding Protein 28, Fbp 28;
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Tcerg1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P070213-08
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk]
  • Biological Unit Coordinates (2ysi.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 2YSI
  • Retrieve 2YSI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YSI from S2C, [Save to disk]
    • View 2YSI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2YSI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2YSI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ysi_A] [2ysi]
  • SWISS-PROT database: [Q8CGF7]
  • Domain organization of [TCRG1_MOUSE] by SWISSPFAM
  • Domain found in 2YSI: [WW ] by SMART
    • Other resources with information on 2YSI
  • Community annotation for 2YSI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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