2YTU Signaling Protein date Apr 05, 2007
title Solution Structure Of The Sam_pnt-Domain Of The Human Friend Leukemiaintegration 1 Transcription Factor
authors A.K.Goroncy, M.Sato, N.Tochio, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Friend Leukemia Integration 1 Transcription Factor;
Chain: A
Fragment: Sam_pnt Domain
Synonym: Fli-1 Proto- Oncogene, Ergb Transcription Factor
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fli1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P061225-64
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (690 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2YTU
  • Original NMR restraints for 2YTU from PDB
  • Retrieve 2YTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YTU from S2C, [Save to disk]
  • View 2YTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YTU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YTU, from MSDmotif at EBI
  • Fold representative 2ytu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ytu] [2ytu_A]
  • SWISS-PROT database: [Q01543]
  • Domain organization of [FLI1_HUMAN] by SWISSPFAM
  • Domain found in 2YTU: [SAM_PNT ] by SMART
  • Other resources with information on 2YTU
  • Community annotation for 2YTU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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