2YVU	Transferase	date	Apr 15, 2007
title	Crystal Structure Of Ape1195
authors	R.Ishii, Y.Bessho, S.Yokoyama, Riken Structural Genomicsproteo Initiative (Rsgi)
compound		source
Molecule: Probable Adenylyl-Sulfate Kinase Chain: A, B Synonym: Ape1195, Aps Kinase, Adenosine-5'-Phosphosulfate K Adenosine-5'-Phosphosulfate 3'-Phosphotransferase; Ec: 2.7.1.25 Engineered: Yes		Organism_scientific: Aeropyrum Pernix Organism_taxid: 272557 Strain: K1 Gene: Cysc Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Codonplus(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-21a
symmetry	Space Group: P 1 21 1	R_factor 0.202 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.010 102.820 45.580 90.00 96.67 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand		enzyme	Transferase E.C.2.7.1.25 BRENDA
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (2yvu.pdb1.gz) 58 Kb CSU: Contacts of Structural Units for 2YVU Likely Quarternary Molecular Structure file(s) for 2YVU Structure Factors (203 Kb) Retrieve 2YVU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YVU from S2C, [Save to disk] Re-refined 2yvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YVU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2YVU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2YVU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yvu_B] [2yvu] [2yvu_A] SWISS-PROT database: [Q9YCR6] Domain organization of [CYSC_AERPE] by SWISSPFAM

Other resources with information on 2YVU

Community annotation for 2YVU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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