2YWE Crystal structure of LepA from Aquifex aeolicus date
authors Kawazoe, M., Takemoto, C., Kaminishi, T., Nishino, A., Nakayama-Ushikoshi, R., Hanawa-Suetsugu, K., Terada, T., Shirouzu, M., Yokoyama, S., RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.
compound source
symmetry
R_factor
R_Free 0.27
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A
  • translation elongation facto...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (2ywe.pdb1.gz) 89 Kb
  • CSU: Contacts of Structural Units for 2YWE
  • Likely Quarternary Molecular Structure file(s) for 2YWE
  • Structure Factors (307 Kb)
  • Retrieve 2YWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YWE from S2C, [Save to disk]
  • Re-refined 2ywe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2YWE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2YWE, from MSDmotif at EBI
  • Fold representative 2ywe from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ywe_A] [2ywe]
  • SWISS-PROT database: [O67618]
  • Domain organization of [LEPA_AQUAE] by SWISSPFAM
  • Domain found in 2YWE: [EFG_C ] by SMART
  • Other resources with information on 2YWE
  • Community annotation for 2YWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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