2YXN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AZY enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctional replacement of the endogenous tyrosyl-tRNA synthetase-tRNATyr pair by the archaeal tyrosine pair in Escherichia coli for genetic code expansion., Iraha F, Oki K, Kobayashi T, Ohno S, Yokogawa T, Nishikawa K, Yokoyama S, Sakamoto K, Nucleic Acids Res. 2010 Jun;38(11):3682-91. Epub 2010 Feb 16. PMID:20159998
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2yxn.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 2YXN
  • CSU: Contacts of Structural Units for 2YXN
  • Likely Quarternary Molecular Structure file(s) for 2YXN
  • Structure Factors (288 Kb)
  • Retrieve 2YXN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YXN from S2C, [Save to disk]
  • Re-refined 2yxn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YXN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yxn] [2yxn_A]
  • SWISS-PROT database: [P0AGJ9]

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