2Z8C Transferase date Sep 05, 2007
title Phosphorylated Insulin Receptor Tyrosine Kinase In Complex W {[5-Carbamoyl-4-(3-Methylanilino)Pyrimidin-2-Yl]Amino}Pheny Acid
authors N.Katayama, H.Kurihara
compound source
Molecule: Insulin Receptor
Chain: A
Fragment: Tyrosine Kinase Domain
Synonym: Ir, Cd220 Antigen
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Insr
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Baculovirus

Molecule: 6-Mer Peptide From Insulin Receptor Substrate 1
Chain: B
Synonym: Irs-1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Irs1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 32 2 1
R_factor 0.217 R_Free 0.292
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.540 71.540 133.850 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.25 Å
ligand PTR, S91 enzyme Transferase E.C.2.7.10.1 BRENDA
Primary referenceIdentification of a key element for hydrogen-bonding patterns between protein kinases and their inhibitors., Katayama N, Orita M, Yamaguchi T, Hisamichi H, Kuromitsu S, Kurihara H, Sakashita H, Matsumoto Y, Fujita S, Niimi T, Proteins. 2008 Sep 2;73(4):795-801. PMID:18767165
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2z8c.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 2Z8C
  • CSU: Contacts of Structural Units for 2Z8C
  • Likely Quarternary Molecular Structure file(s) for 2Z8C
  • Structure Factors (65 Kb)
  • Retrieve 2Z8C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Z8C from S2C, [Save to disk]
  • Re-refined 2z8c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Z8C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Z8C
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2Z8C, from MSDmotif at EBI
  • Fold representative 2z8c from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2z8c_A] [2z8c] [2z8c_B]
  • SWISS-PROT database: [P06213] [P35568]
  • Domain organization of [INSR_HUMAN] [IRS1_HUMAN] by SWISSPFAM
  • Domain found in 2Z8C: [TyrKc ] by SMART
  • Other resources with information on 2Z8C
  • Community annotation for 2Z8C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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