2ZJQ Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit date
authors Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
compound source
symmetry
R_factor
R_Free 0.3386
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.30
Gene
Ontology
ChainFunctionProcessComponent
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Primary referenceTranslational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin., Harms JM, Wilson DN, Schluenzen F, Connell SR, Stachelhaus T, Zaborowska Z, Spahn CM, Fucini P, Mol Cell. 2008 Apr 11;30(1):26-38. PMID:18406324
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1492 Kb) [Save to disk]
  • Biological Unit Coordinates (2zjq.pdb1.gz) 1479 Kb
  • CSU: Contacts of Structural Units for 2ZJQ
  • Likely Quarternary Molecular Structure file(s) for 2ZJQ
  • Structure Factors (3195 Kb)
  • Retrieve 2ZJQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZJQ from S2C, [Save to disk]
  • Re-refined 2zjq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZJQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZJQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZJQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zjq_Y] [2zjq_4] [2zjq_V] [2zjq_G] [2zjq_A] [2zjq_I] [2zjq_M] [2zjq_2] [2zjq_Q] [2zjq_J] [2zjq_O] [2zjq_U] [2zjq_Z] [2zjq_F] [2zjq_L] [2zjq_B] [2zjq_3] [2zjq_D] [2zjq_S] [2zjq_W] [2zjq] [2zjq_5] [2zjq_C] [2zjq_N] [2zjq_E] [2zjq_H] [2zjq_K] [2zjq_1] [2zjq_R] [2zjq_X] [2zjq_P] [2zjq_T]
  • SWISS-PROT database: [Q9RSS7] [Q9RXY1] [Q9RXJ2] [Q9RSK9] [Q9RXJ5] [Q9RSJ5] [Q9RSL2] [Q9RWB4] [Q9RSW7] [Q9RY64] [Q9RXJ7] [Q9RXK0] [Q9RXJ1] [Q9RX88] [Q9RY65] [Q9RRG8] [Q9RXJ4] [Q9RXJ9] [Q9RSL0] [P49228] [Q9RSS4] [Q9RSH2] [Q9RSW6] [Q9RSK0] [Q9RXK2] [Q9RXK1] [Q9RXJ0] [Q9RSL3] [Q9RST0]
  • Domain organization of [RL11_DEIRA] [RL13_DEIRA] [RL14_DEIRA] [RL15_DEIRA] [RL16_DEIRA] [RL17_DEIRA] [RL18_DEIRA] [RL19_DEIRA] [RL20_DEIRA] [RL21_DEIRA] [RL22_DEIRA] [RL23_DEIRA] [RL24_DEIRA] [RL25_DEIRA] [RL27_DEIRA] [RL28_DEIRA] [RL29_DEIRA] [RL2_DEIRA] [RL30_DEIRA] [RL32_DEIRA] [RL33_DEIRA] [RL34_DEIRA] [RL35_DEIRA] [RL36_DEIRA] [RL3_DEIRA] [RL4_DEIRA] [RL5_DEIRA] [RL6_DEIRA] [RL7_DEIRA] by SWISSPFAM
  • Domains found in 2ZJQ: [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C ] by SMART
  • Other resources with information on 2ZJQ
  • Community annotation for 2ZJQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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