2ZJW Transferase date Mar 11, 2008
title Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic
authors Y.Sekiguchi, T.Kinoshita, T.Nakaniwa, T.Tada
compound source
Molecule: Casein Kinase II Subunit Alpha
Chain: A
Fragment: Protein Kinase Domain, Unp Residues 1-335
Synonym: Ck II
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hms174
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex 6p-1
symmetry Space Group: P 21 21 21
R_factor 0.222 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.953 75.883 78.421 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand REF BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insight into human CK2alpha in complex with the potent inhibitor ellagic acid., Sekiguchi Y, Nakaniwa T, Kinoshita T, Nakanishi I, Kitaura K, Hirasawa A, Tsujimoto G, Tada T, Bioorg Med Chem Lett. 2009 Jun 1;19(11):2920-3. Epub 2009 Apr 22. PMID:19414254
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (2zjw.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 2ZJW
  • CSU: Contacts of Structural Units for 2ZJW
  • Likely Quarternary Molecular Structure file(s) for 2ZJW
  • Structure Factors (94 Kb)
  • Retrieve 2ZJW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZJW from S2C, [Save to disk]
  • Re-refined 2zjw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZJW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZJW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZJW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zjw_A] [2zjw]
  • SWISS-PROT database: [P68400]
  • Domain organization of [CSK21_HUMAN] by SWISSPFAM
  • Domain found in 2ZJW: [S_TKc ] by SMART
  • Other resources with information on 2ZJW
  • Community annotation for 2ZJW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science