2ZKE | Ligase | date | Mar 19, 2008 |
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title | Crystal Structure Of The Sra Domain Of Mouse Np95 In Complex Hemi-Methylated Cpg Dna | ||||||||||||||
authors | K.Arita, M.Ariyoshi, H.Tochio, Y.Nakamura, M.Shirakawa | ||||||||||||||
compound | source | ||||||||||||||
Molecule: E3 Ubiquitin-Protein Ligase Uhrf1 Chain: A Fragment: Unp Residues 404-613 Synonym: Ubiquitin-Like Phd And Ring Finger Domain-Containi 1, Ubiquitin-Like-Containing Phd And Ring Finger Domains Pr Nuclear Zinc Finger Protein Np95, Nuclear Protein 95; Ec: 6.3.2.- Engineered: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Uhrf1, Np95 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex | ||||||||||||||
Molecule: Dna (5'-D(Dcpdtpdapdcpdcpdgpdgpdapdtpdt 3'); Chain: C Engineered: Yes |
Synthetic: Yes Other_details: Nucleotide Synthesis | ||||||||||||||
Molecule: Dna (5'-D(Dgpdcpdapdapdtpdcp(5cm) Pdgpdgpdtpdapdg)-3'); Chain: D Engineered: Yes |
Synthetic: Yes Other_details: Nucleotide Synthesis | ||||||||||||||
symmetry | Space Group: P 41 21 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.60 Å | ||||||||||||
ligand | 5CM | enzyme | Ligase E.C.6.3.2 BRENDA | ||||||||||||
Primary reference | Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism., Arita K, Ariyoshi M, Tochio H, Nakamura Y, Shirakawa M, Nature. 2008 Oct 9;455(7214):818-21. Epub 2008 Sep 3. PMID:18772891 |
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